STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20641.1Putative cytoplasmic protein. (356 aa)    
Predicted Functional Partners:
EFL20642.1
Metabolite-proton symporter.
       0.757
EFL26101.1
Conserved hypothetical protein.
  
  0.753
EFL20640.1
Regulatory protein GntR, HTH.
       0.658
EFL21687.1
alfa-L-rhamnosidase.
  
  0.623
EFL26656.1
Putative neuramidase; Truncated CDS; unextendable partial coding region.
 
  
 0.564
EFL22224.1
Putative neuraminidase.
 
  
 0.502
EFL20643.1
Periplasmic beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
       0.463
EFL28005.1
Putative secreted protein; Truncated CDS.
  
    0.445
EFL22457.1
Putative alpha-L-fucosidase.
 
  
  0.435
EFL21178.1
alpha-L-rhamnosidase.
  
  0.431
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.