STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20647.1Integral membrane protein. (204 aa)    
Predicted Functional Partners:
EFL21996.1
Mg++ transport, ATPase.
  
  
 0.872
EFL21528.1
Putative integral membrane protein.
 
     0.710
EFL21036.1
HhH-GPD family base excision DNA repair protein; Truncated CDS.
 
     0.658
EFL24574.1
Putative integral membrane protein; Unextendable partial coding region.
 
     0.622
EFL24400.1
Putative integral membrane protein.
     
 0.607
EFL24731.1
Putative membrane protein.
      
 0.589
EFL25055.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
  
 0.579
EFL21530.1
LigA protein.
 
     0.533
EFL27494.1
YhgE/Pip domain-containing protein.
 
   
 0.526
EFL21500.1
Polyketide cyclase/dehydrase superfamily protein.
  
     0.519
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.