Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL20651.1Conserved hypothetical protein. (119 aa)    
Predicted Functional Partners:
EFL27369.1
Hydrolase.
 
   
 0.731
EFL27364.1
Short chain dehydrogenase/reductase family oxidoreductase.
 
     0.715
EFL27368.1
Putative D-threo-aldose 1-dehydrogenase.
 
     0.671
EFL21005.1
Putative AP endonuclease, family 2 protein.
 
    0.616
aroQ
3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
       0.489
EFL25964.1
Nipsnap superfamily protein.
  
     0.473
EFL20650.1
streptogrisin-D (Serine protease D) (SGPD); unextendable partial coding region.
       0.462
EFL25448.1
Conserved hypothetical protein.
  
     0.444
EFL23654.1
LigA protein.
  
     0.437
EFL28459.1
Putative alpha-L-fucosidase.
 
     0.433
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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