STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20651.1Conserved hypothetical protein. (119 aa)    
Predicted Functional Partners:
EFL27369.1
Hydrolase.
 
  
 0.814
EFL27364.1
Short chain dehydrogenase/reductase family oxidoreductase.
 
    0.756
EFL27368.1
Putative D-threo-aldose 1-dehydrogenase.
 
    0.699
EFL28526.1
Putative xylulose kinase; Truncated CDS.
 
  
 0.691
EFL26010.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
   
  
 0.681
EFL21690.1
Rhamnulokinase.
  
  
 0.650
EFL23352.1
Putative FGGY family carbohydrate kinase, N- domain protein.
  
  
 0.650
EFL23355.1
Putative FGGY family carbohydrate kinase, N- domain protein.
  
  
 0.650
EFL26309.1
Xylulokinase; Belongs to the FGGY kinase family.
  
  
 0.650
EFL28184.1
Putative FGGY family of carbohydrate kinase, N- domain-containing protein.
  
  
 0.650
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.