STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20656.1Putative sugar hydrolase. (238 aa)    
Predicted Functional Partners:
EFL20868.1
Conserved hypothetical protein.
 
   
 0.752
EFL22585.1
Putative conjugal transfer protein.
  
     0.743
EFL28505.1
Putative mucin-2 (MUC-2) (Intestinal mucin-2).
 
   
 0.733
EFL26981.1
Putative secreted protein.
  
     0.679
EFL26980.1
Putative secreted protein.
  
     0.675
EFL20726.1
Conserved hypothetical protein; Truncated CDS.
  
     0.634
EFL23915.1
Conserved hypothetical protein.
  
  
  0.626
EFL23567.1
Conserved hypothetical protein.
  
  
  0.570
EFL23603.1
Putative regulatory protein.
  
    0.560
EFL20527.1
Putative secreted protein.
  
   
 0.554
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.