STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20665.1Putative LuxR-family transcriptional regulator. (229 aa)    
Predicted Functional Partners:
EFL20821.1
Putative transcriptional regulator, LuxR family.
 
  0.862
EFL28870.1
Putative transcriptional regulator, LuxR family.
 
  0.800
EFL20819.1
Putative transcriptional regulator, LuxR family.
 
 
   0.777
EFL28873.1
Putative transcriptional regulator, LuxR family.
 
 
   0.770
EFL28869.1
Conserved hypothetical protein.
 
  0.713
EFL28202.1
Putative calcium binding protein.
  
     0.680
EFL20817.1
LigA protein.
 
 
   0.662
EFL28872.1
Tetratricopeptide repeat (3 repeats)-containing protein; Unextendable partial coding region.
 
     0.648
EFL20768.1
Polyketide synthase.
  
   
 0.628
EFL26015.1
LuxR-family transcriptional regulator.
  
 
   0.601
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.