STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20673.1Conserved hypothetical protein. (152 aa)    
Predicted Functional Partners:
EFL20672.1
Putative vegetative cell wall protein gp1 (Hydroxyproline-richglycoprotein 1).
       0.887
EFL20671.1
Hypothetical protein.
       0.746
EFL23898.1
Putative tetratricopeptide repeat protein.
   
 
 0.649
EFL20674.1
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.648
EFL22361.1
LigA protein.
  
 
 0.628
EFL20675.1
TetR family transcriptional regulator.
       0.591
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
   
   0.581
pheT
phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
   0.573
EFL26585.1
N-acetymuramyl-L-alanine amidase-related protein.
  
 
 0.509
EFL24456.1
Putative ABC transport system integral membrane protein.
   
   0.493
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.