STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20679.1Putative LacI-family transcriptional regulatory protein; Unextendable partial coding region. (350 aa)    
Predicted Functional Partners:
EFL20692.1
Regulatory protein, LacI.
  
     0.766
EFL22864.1
Putative transcriptional regulator.
  
     0.766
EFL28242.1
LacI family transcriptional regulator.
  
     0.765
EFL29204.1
Putative transcriptional regulator.
  
     0.762
EFL21011.1
Putative DeoR-family transcriptional regulator.
  
     0.698
EFL26930.1
Glutamate synthase large subunit.
    
 
 0.681
EFL20678.1
Putative acyl-CoA dehydrogenase.
       0.599
EFL22730.1
HPr family phosphocarrier.
   
 
 0.583
EFL21630.1
Non-ribosomal peptide synthetase.
    
   0.563
EFL21631.1
Non-ribosomal peptide synthetase, component; Overlaps another CDS with the same product name.
    
   0.563
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.