Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL20691.1Conserved hypothetical protein; Truncated CDS. (204 aa)    
Predicted Functional Partners:
EFL23033.1
Hypothetical protein.
  
     0.763
EFL26547.1
Superoxide dismutase, copper/zinc binding.
 
 0.759
EFL23545.1
Alkyl hydroperoxide reductase C.
  
 
 0.721
EFL27086.1
Conserved hypothetical protein.
  
     0.720
EFL26245.1
Conserved hypothetical protein.
   
  
 0.675
EFL22597.1
PE-PGRS family protein.
  
     0.670
EFL27779.1
Putative PAS fold protein.
 
     0.663
EFL28443.1
PE-PGRS family protein.
  
     0.654
EFL24787.1
Putative hydrolase, NUDIX family.
  
     0.653
EFL29392.1
LigA protein.
  
     0.645
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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