STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20692.1Regulatory protein, LacI. (150 aa)    
Predicted Functional Partners:
EFL26368.1
LacI-family transcriptional regulator.
  
     0.768
EFL26324.1
LacI family ribose operon repressor.
  
     0.767
EFL28633.1
Putative transcriptional regulator.
  
     0.767
EFL20679.1
Putative LacI-family transcriptional regulatory protein; Unextendable partial coding region.
  
     0.766
EFL27463.1
LacI family transcriptional repressor.
  
     0.766
EFL28352.1
Ribose operon repressor.
  
     0.766
EFL28528.1
Ribose operon repressor.
  
     0.766
EFL20978.1
LacI family transcriptional regulator.
  
     0.764
EFL28975.1
LacI family transcription regulator.
  
     0.764
EFL25967.1
Putative LacI-family transcriptional regulator; Unextendable partial coding region.
  
     0.763
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.