STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20699.1Cobaltochelatase, CobN subunit. (1209 aa)    
Predicted Functional Partners:
EFL27122.1
cob(I)yrinic acid a,c-diamide adenosyltransferase.
 
  
 0.996
EFL27123.1
Subunit D/I family magnesium chelatase.
 
 0.992
EFL27124.1
Putative magnesium chelatase; Unextendable partial coding region.
 
 0.992
EFL27121.1
Cobyrinic Acid a,c-diamide synthase.
 
 
 0.991
cobD
Cobalamin biosynthesis protein D; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
   
 0.959
EFL20706.1
precorrin-6Y C(5,15)-methyltransferase [decarboxylating] (Precorrin-6 methyltransferase) (Precorrin-6Y methylase).
 
  
 0.958
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.951
EFL20702.1
precorrin-3B C(17)-methyltransferase; Truncated CDS; unextendable partial coding region.
 
  
 0.949
EFL20705.1
Precorrin-4 C(11)-methyltransferase; Belongs to the precorrin methyltransferase family.
 
   
 0.941
EFL21918.1
Putative methyltransferase.
 
  
 0.932
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.