STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20714.1Putative endo alpha-1,4 polygalactosaminidase. (279 aa)    
Predicted Functional Partners:
EFL20721.1
Conserved hypothetical protein.
 
     0.828
EFL20720.1
Putative lipopolysaccharide glycosyltransferase.
 
   
 0.805
EFL20715.1
Conserved hypothetical protein.
       0.790
EFL20717.1
Putative mannose-1-phosphate guanyltransferase.
 
     0.665
EFL20719.1
Conserved hypothetical protein; Unextendable partial coding region.
     
 0.606
EFL20716.1
Putative SnoG protein.
       0.605
EFL26766.1
Dihydrolipoyl dehydrogenase.
       0.605
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
       0.605
cysS
cysteine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.470
EFL26765.1
Dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex.
       0.459
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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