STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20718.1NAD-dependent epimerase/dehydratase. (344 aa)    
Predicted Functional Partners:
EFL27759.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
 
 
 0.991
EFL21234.1
Putative polysaccharide biosynthesis protein.
 
 
 0.990
EFL20717.1
Putative mannose-1-phosphate guanyltransferase.
 
 
 0.988
EFL23215.1
Glucose-1-phosphate thymidylyltransferase.
 
 
 0.988
EFL25894.1
Glycosyl transferase.
 
 
 0.963
EFL25118.1
Glycosyl transferase.
 
 
 0.960
EFL20791.1
3-amino-5-hydroxybenzoic acid synthase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.928
EFL23216.1
Daunorubicin biosynthesis sensory transduction protein DnrJ; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.922
EFL27777.1
GDP-mannose 6-dehydrogenase AlgD; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.917
EFL20788.1
UDP-glucose dehydrogenase.
 
 
 0.914
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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