STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20728.1Putative integral membrane protein. (320 aa)    
Predicted Functional Partners:
EFL22577.1
4-alpha-D-((1-4)-alpha-D-glucano)trehalose trehalohydrolase; Truncated CDS; Belongs to the glycosyl hydrolase 13 family.
   
 0.734
EFL23096.1
1,4-alpha-glucan branching enzyme.
   
 0.731
EFL23088.1
Alpha-glucan phosphorylase.
  
 0.686
EFL27778.1
Putative glucosyltransferase.
  
 
 0.683
EFL23393.1
Putative ATP-dependent DNA helicase PcrA.
    
 
 0.654
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.652
EFL21630.1
Non-ribosomal peptide synthetase.
   
 
 0.639
EFL27601.1
Polyketide synthase; Truncated CDS.
     
 0.633
EFL21385.1
Mannose-1-phosphate guanyltransferase.
  
 0.632
EFL20727.1
PAP2 superfamily domain protein.
  
 
  0.614
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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