Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL20730.1Conserved hypothetical protein. (233 aa)    
Predicted Functional Partners:
EFL23919.1
Putative membrane protein.
  
     0.653
EFL20729.1
Conserved hypothetical protein.
       0.563
EFL22191.1
Putative ricin-type beta-trefoil lectin domain protein.
  
     0.543
EFL24594.1
Basic proline-rich protein.
  
     0.539
EFL20731.1
Putative transcriptional regulator, PadR family.
       0.529
EFL20732.1
Conserved hypothetical protein.
       0.529
EFL20733.1
Putative PAP2 family protein.
       0.512
EFL23022.1
Conserved hypothetical protein.
  
     0.482
EFL21958.1
Conserved hypothetical protein.
  
 
 0.479
EFL23839.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
 
   0.479
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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