STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20787.1Conserved hypothetical protein. (401 aa)    
Predicted Functional Partners:
EFL20788.1
UDP-glucose dehydrogenase.
       0.619
EFL28515.1
Bifunctional P-450/NADPH-P450 reductase (Cytochrome P450(BM-3))(P450BM-3).
 
  0.607
EFL20831.1
Probable bifunctional P-450/NADPH-P450 reductase 1.
 
  0.594
EFL20784.1
Modular polyketide synthase.
 
  
 0.584
EFL23231.1
Conserved hypothetical protein.
  
    0.584
EFL20793.1
Putative regulatory protein.
 
     0.569
EFL20789.1
Putative Pyranose oxidase (Glucose 2-oxidase).
 
     0.526
EFL28516.1
Putative PAS fold protein.
  
    0.514
EFL21630.1
Non-ribosomal peptide synthetase.
  
 
 0.509
EFL20783.1
Modular polyketide synthase; Overlaps another CDS with the same product name.
 
  
 0.508
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.