STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20789.1Putative Pyranose oxidase (Glucose 2-oxidase). (511 aa)    
Predicted Functional Partners:
EFL21720.1
Ankyrin domain protein.
  
 
 0.788
EFL25386.1
Shikimate kinase.
     
 0.780
EFL21270.1
Conserved hypothetical protein.
    
 0.760
EFL26386.1
Hypothetical protein.
    
 0.760
EFL26611.1
Hypothetical protein.
    
 0.760
EFL26625.1
Conserved hypothetical protein.
    
 0.760
EFL22251.1
Pyruvate, water dikinase.
    
  0.679
EFL25229.1
Wyosine base formation superfamily protein.
    
  0.679
EFL22310.1
Putative secreted protein.
  
 
 0.633
EFL26791.1
Cytochrome c family protein.
  
 
 0.633
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.