Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL20820.1LigA protein. (861 aa)    
Predicted Functional Partners:
EFL20819.1
Putative transcriptional regulator, LuxR family.
 
    
0.848
EFL20821.1
Putative transcriptional regulator, LuxR family.
 
 
0.642
EFL26052.1
LuxR-family transcriptional regulator.
  
     0.584
EFL27779.1
Putative PAS fold protein.
  
  
 0.519
EFL20818.1
Putative LuxR-family transcriptional regulator.
 
     0.506
EFL28516.1
Putative PAS fold protein.
  
     0.486
EFL23213.1
dTDP-4-keto-6-deoxy-L-hexose2,3-dehydratase.
  
     0.484
EFL27781.1
LigA protein.
  
     0.455
EFL27782.1
Putative collagen alpha-1(I) chain (Alpha-1 type I collagen).
  
     0.455
EFL22597.1
PE-PGRS family protein.
  
     0.452
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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