STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20854.1Xre family toxin-antitoxin system, antitoxin component. (285 aa)    
Predicted Functional Partners:
EFL20856.1
Methyltransferase domain protein.
 
     0.925
EFL20855.1
Putative toxin-antitoxin system, toxin component.
 
     0.920
EFL22039.1
Conserved hypothetical protein; Unextendable partial coding region.
 
     0.789
EFL25211.1
Conserved hypothetical protein.
 
     0.788
EFL28434.1
Conserved hypothetical protein.
 
     0.787
EFL25289.1
Conserved hypothetical protein.
 
     0.786
EFL28425.1
Conserved hypothetical protein.
 
     0.786
EFL28863.1
Putative toxin-antitoxin system, toxin component.
 
     0.784
EFL28174.1
Conserved hypothetical protein.
 
     0.781
EFL21055.1
Putative toxin-antitoxin system, toxin component.
 
     0.779
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.