STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20855.1Putative toxin-antitoxin system, toxin component. (91 aa)    
Predicted Functional Partners:
EFL20856.1
Methyltransferase domain protein.
 
     0.935
EFL20854.1
Xre family toxin-antitoxin system, antitoxin component.
 
   
 0.923
EFL25781.1
Xre family toxin-antitoxin system, antitoxin component.
  
   
 0.786
EFL28426.1
Xre family toxin-antitoxin system, antitoxin component.
 
   
 0.777
EFL21054.1
Xre family toxin-antitoxin system, antitoxin component.
 
   
 0.775
EFL28865.1
Xre family toxin-antitoxin system, antitoxin component; Unextendable partial coding region.
 
   
 0.774
EFL22041.1
Xre family toxin-antitoxin system, antitoxin component.
 
   
 0.770
EFL25048.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.760
EFL24956.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.753
EFL27054.1
Xre family toxin-antitoxin system, antitoxin component.
  
   
 0.737
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.