Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL20862.1Coenzyme PQQ synthesis protein D. (112 aa)    
Predicted Functional Partners:
pqqC
Coenzyme PQQ biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.
 
  
 0.979
pqqE
Coenzyme PQQ biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).
 
  
 0.978
EFL20864.1
Coenzyme PQQ synthesis protein B.
       0.773
EFL23508.1
Radical SAM.
 
  
 0.663
EFL24014.1
Radical SAM.
 
  
 0.645
EFL26930.1
Glutamate synthase large subunit.
      
 0.605
EFL20870.1
Putative di-trans,poly-cis-decaprenylcistransferase.
       0.572
EFL20860.1
Short chain dehydrogenase/reductase family oxidoreductase.
       0.552
EFL22049.1
Hopanoid biosynthesis associated radical SAM protein HpnH.
 
  
 0.487
EFL23579.1
Radical SAM.
 
  
 0.465
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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