STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20868.1Conserved hypothetical protein. (290 aa)    
Predicted Functional Partners:
EFL20867.1
Mucin; Tracheobronchial mucin.
 
     0.878
EFL20866.1
exo-poly-alpha-D-galacturonosidase; Belongs to the glycosyl hydrolase 28 family.
 
     0.812
EFL23915.1
Conserved hypothetical protein.
 
  
  0.788
EFL20869.1
Glucose/sorbosone dehydrogenase.
       0.772
EFL20656.1
Putative sugar hydrolase.
 
   
 0.752
EFL20726.1
Conserved hypothetical protein; Truncated CDS.
  
     0.686
EFL22024.1
PE-PGRS family protein.
  
     0.623
EFL22345.1
Conserved hypothetical protein.
  
     0.581
EFL23022.1
Conserved hypothetical protein.
  
     0.564
EFL28116.1
Putative fosmidmycin resistance protein.
  
     0.557
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.