STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20870.1Putative di-trans,poly-cis-decaprenylcistransferase. (383 aa)    
Predicted Functional Partners:
EFL27099.1
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
     0.837
EFL28332.1
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
     0.808
EFL21712.1
Putative rhamnogalacturonan acetylesterase.
 
  
  0.801
EFL27102.1
Carbohydrate esterase, Family 12 YesY.
 
  
  0.793
EFL20866.1
exo-poly-alpha-D-galacturonosidase; Belongs to the glycosyl hydrolase 28 family.
 
     0.761
EFL20871.1
D-amino-acid dehydrogenase small subunit; Truncated CDS; unextendable partial coding region.
       0.737
EFL20872.1
Putative metabolite transport protein YaaU.
       0.737
EFL20867.1
Mucin; Tracheobronchial mucin.
 
     0.734
EFL25044.1
alpha-N-arabinofuranosidase 2 (Alpha-N-arabinofuranosidase II) (Arabinosidase II) (Alpha-N-AFase II); Belongs to the glycosyl hydrolase 43 family.
  
     0.689
EFL26411.1
Glycoside Hydrolase Family 43.
 
     0.686
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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