Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL20871.1D-amino-acid dehydrogenase small subunit; Truncated CDS; unextendable partial coding region. (408 aa)    
Predicted Functional Partners:
EFL21394.1
D-amino-acid dehydrogenase small subunit.
  
     0.774
EFL20872.1
Putative metabolite transport protein YaaU.
       0.773
EFL26930.1
Glutamate synthase large subunit.
 
 
 0.768
EFL20870.1
Putative di-trans,poly-cis-decaprenylcistransferase.
       0.737
EFL26613.1
Putative N-methylproline demethylase.
  
 0.723
EFL20406.1
FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family.
  
 0.656
EFL21418.1
FAD dependent oxidoreductase/aminomethyl transferase; Belongs to the GcvT family.
  
 0.656
EFL23862.1
FAD dependent oxidoreductase.
  
 0.656
EFL21377.1
Glycine dehydrogenase; Truncated CDS; Belongs to the GcvP family.
   
 
 0.641
EFL27376.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
 0.638
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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