Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL20895.1Transposase, IS4; Unextendable partial coding region. (150 aa)    
Predicted Functional Partners:
EFL20896.1
IS5 family transposase.
 
     0.942
EFL27653.1
Transposase, IS4.
 
    0.804
EFL20309.1
ISBm1, transposase OrfA.
  
     0.737
EFL20321.1
ISBm1, transposase OrfA.
  
     0.737
EFL20401.1
ISBm1, transposase OrfA.
  
     0.737
EFL23706.1
ISBm1, transposase OrfA.
  
     0.737
EFL25778.1
ISBm1, transposase OrfA.
  
     0.737
EFL29202.1
ISBm1, transposase OrfA.
  
     0.737
EFL20897.1
Aldehyde dehydrogenase (NAD) family protein; Unextendable partial coding region.
       0.545
EFL29407.1
Putative insertion element transposase.
  
     0.532
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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