Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL20915.1Putative mucin-2 (MUC-2) (Intestinal mucin-2). (284 aa)    
Predicted Functional Partners:
EFL20914.1
LigA protein.
 
   
 0.928
EFL20919.1
Putative extracellular solute-binding protein, family 1.
  
     0.752
EFL20916.1
Hypothetical protein.
       0.634
EFL22926.1
Nitrogen regulatory protein P-II.
    
 
 0.519
EFL26530.1
Nitrogen regulatory protein P-II.
    
 
 0.519
EFL22354.1
ADP-ribosylglycohydrolase superfamily protein.
  
     0.477
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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