STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20920.1GntR family transcriptional regulator. (270 aa)    
Predicted Functional Partners:
EFL22104.1
GntR family transcriptional regulator.
  
     0.767
EFL20921.1
Cytidine/uridine-specific hydrolase; Truncated CDS.
 
     0.649
EFL27183.1
GntR family transcriptional regulator; Truncated CDS.
  
    0.622
EFL22554.1
GntR family transcriptional regulator.
  
    0.589
EFL21333.1
L-asparagine operon repressor (GntR family); Truncated CDS.
  
    0.578
EFL20919.1
Putative extracellular solute-binding protein, family 1.
   
   0.577
EFL27999.1
GntR family L-asparagine operon transcriptional regulator (repressor).
  
    0.536
EFL29313.1
GntR family transcriptional regulator.
  
    0.532
EFL21257.1
GntR family transcriptional regulator.
  
    0.528
EFL26418.1
GntR family transcriptional regulator.
  
    0.518
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.