STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20928.1PE-PGRS family protein. (602 aa)    
Predicted Functional Partners:
EFL20929.1
Hypothetical protein.
       0.816
EFL20927.1
Putative ATP/GTP-binding protein.
 
     0.750
EFL24032.1
Radical SAM.
     0.725
EFL24033.1
Putative ATP/GTP-binding protein.
  
     0.721
EFL23293.1
Putative ATP/GTP-binding protein.
 
     0.702
EFL20925.1
Collagen alpha-1(III) chain.
  
     0.636
arcA
Arginine deiminase.
       0.593
EFL21178.1
alpha-L-rhamnosidase.
  
 
 0.582
EFL21249.1
Heavy metal-associated domain protein.
  
 
 0.582
EFL21686.1
Basic proline-rich protein.
  
 
 0.582
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.