Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL20930.1Putative lipoprotein. (248 aa)    
Predicted Functional Partners:
EFL20931.1
Conserved hypothetical protein.
 
     0.578
EFL25804.1
Putative regulatory protein.
  
     0.567
EFL20928.1
PE-PGRS family protein.
 
     0.550
EFL26805.1
Metallophosphoesterase.
  
     0.497
EFL20929.1
Hypothetical protein.
       0.478
EFL20932.1
Putative phosphoribosyl transferase.
       0.465
EFL24601.1
Conserved hypothetical protein.
  
     0.463
EFL22101.1
Regulatory protein, LuxR.
  
     0.456
EFL22592.1
Oxidoreductase, molybdopterin binding protein.
  
     0.417
EFL25946.1
ABC transporter, permease/ATP-binding protein.
  
     0.417
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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