STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20937.1Putative sugar ABC transporter, substrate-binding protein. (469 aa)    
Predicted Functional Partners:
EFL20936.1
Transmembrane permease MsmF.
 
  0.982
EFL20935.1
Probable sugar ABC transporter, permease protein.
 
 0.956
EFL20411.1
Sugar ABC transporter, permease.
 
  0.929
EFL20410.1
ABC transporter, permease.
 
 0.922
EFL25135.1
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.913
EFL28085.1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
  
 0.880
EFL20477.1
Sugar ABC transporter, permease.
 
  0.879
EFL25663.1
Putative sugar ABC transporter, permease protein.
 
 0.843
EFL25664.1
ABC transporter, permease.
 
  0.803
EFL20938.1
Putative sugar kinase; Truncated CDS.
 
    0.802
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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