STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20941.1DeoR family transcriptional regulator. (253 aa)    
Predicted Functional Partners:
EFL23765.1
PTS system, fructose-specific family, IIABC component.
 
  
 0.814
EFL25612.1
PTS system, fructose-specific IIABC component.
 
  
 0.789
EFL23766.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.788
EFL25167.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.730
EFL22728.1
GNAT family acetyltransferase.
    
   0.567
EFL22729.1
GNAT family acetyltransferase.
    
   0.567
EFL20942.1
Putative sugar ABC transporter, periplasmic sugar-binding protein.
       0.472
EFL20940.1
6-phospho-beta-glucosidase.
  
    0.428
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.