STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20947.14-hydroxy-2-oxovalerate aldolase (HOA); Belongs to the HpcH/HpaI aldolase family. (255 aa)    
Predicted Functional Partners:
EFL28137.1
2-oxopent-4-enoate hydratase.
 
 0.881
EFL27667.1
Hydratase/decarboxylase.
 
 
 0.820
EFL27666.1
4-oxalocrotonate decarboxylase.
 
 
 0.818
EFL28376.1
TodF product hydratase.
 
 
 0.803
EFL25264.1
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.747
EFL26734.1
Putative isomerase.
  
  
 0.714
EFL20890.1
Succinate-semialdehyde dehydrogenase; Truncated CDS; unextendable partial coding region.
  
 
 0.670
EFL20897.1
Aldehyde dehydrogenase (NAD) family protein; Unextendable partial coding region.
  
 
 0.670
EFL25049.1
Benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.578
EFL27136.1
Benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.578
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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