STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20960.1Putative hydrolase; Truncated CDS; Belongs to the glycosyl hydrolase 2 family. (764 aa)    
Predicted Functional Partners:
EFL21207.1
Putative beta-glucuronidase; Unextendable partial coding region; Belongs to the glycosyl hydrolase 2 family.
 
     0.637
EFL20959.1
Short-chain dehydrogenase/reductase family oxidoreductase.
  
 
  0.605
EFL29293.1
Beta-galactosidase (Lactase).
 
     0.569
EFL22078.1
Beta-galactosidase (Lactase).
 
     0.557
EFL29054.1
Putative alpha-arabinofuranosidase II.
 
 
  0.551
EFL28918.1
Arylsulfatase.
 
 0.529
EFL28212.1
Putative endo-1,4-beta-xylanase.
 
  
  0.525
EFL27772.1
Oxidoreductase.
  
  
 0.518
EFL28629.1
Beta-galactosidase (Lactase).
 
     0.516
EFL26301.1
Alpha-galactosidase.
 
 
 0.508
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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