STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20980.1ABC transporter, permease. (285 aa)    
Predicted Functional Partners:
EFL20981.1
ABC transporter, permease.
 
  0.995
EFL20979.1
Putative bacterial extracellular solute-binding protein.
 
  0.982
EFL25135.1
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.979
EFL28085.1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 
 0.965
EFL29256.1
Putative sugar ABC transporter, sugar-binding protein.
 
 0.884
EFL20410.1
ABC transporter, permease.
 
  0.863
EFL20476.1
Sugar permease.
 
  0.863
EFL20917.1
Sugar ABC transporter, permease.
 
  0.863
EFL26326.1
Sugar ABC transporter, permease.
 
  0.863
EFL27073.1
Sugar ABC transporter, permease.
 
  0.863
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.