STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL20988.1Alcohol dehydrogenase, zinc-containing. (355 aa)    
Predicted Functional Partners:
EFL29096.1
NAD-dependent alcohol dehydrogenase.
 
 
0.863
EFL21095.1
Putative zinc-containing dehydrogenase.
  
  
 
0.830
EFL23765.1
PTS system, fructose-specific family, IIABC component.
  
 
 0.767
EFL25612.1
PTS system, fructose-specific IIABC component.
  
 
 0.767
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.724
EFL24720.1
Putative flavohemoprotein.
   
 
 0.714
EFL28546.1
PTS system, IIA component.
  
 
 0.686
EFL26062.1
Zinc-binding dehydrogenase.
 
 
0.653
EFL20878.1
Alcohol dehydrogenase, zinc-containing; Unextendable partial coding region.
 
 
0.645
EFL29029.1
Benzoate dioxygenase, ferredoxin reductase component.
  
 
 0.611
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.