Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL21005.1Putative AP endonuclease, family 2 protein. (385 aa)    
Predicted Functional Partners:
EFL23765.1
PTS system, fructose-specific family, IIABC component.
  
 
  0.701
EFL25612.1
PTS system, fructose-specific IIABC component.
  
 
  0.701
EFL21006.1
Conserved hypothetical protein.
 
     0.688
EFL21007.1
Putative 2-hydroxyacid-family dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.661
EFL20651.1
Conserved hypothetical protein.
 
    0.616
EFL21008.1
Putative ABC-type sugar transport system, permease component.
 
    0.590
EFL21010.1
Putative extracellular solute-binding lipoprotein.
 
    0.557
EFL21009.1
Putative ABC-type sugar transport system, permease component.
 
    0.554
EFL20608.1
4-amino-4-deoxychorismate synthase, component I.
    
  0.522
EFL22263.1
Anthranilate synthase, phenazine specific.
    
  0.522
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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