STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21011.1Putative DeoR-family transcriptional regulator. (361 aa)    
Predicted Functional Partners:
EFL28975.1
LacI family transcription regulator.
  
     0.740
EFL20978.1
LacI family transcriptional regulator.
  
     0.734
EFL21006.1
Conserved hypothetical protein.
 
     0.721
EFL26324.1
LacI family ribose operon repressor.
  
     0.721
EFL28242.1
LacI family transcriptional regulator.
  
     0.720
EFL26368.1
LacI-family transcriptional regulator.
  
     0.718
EFL28535.1
LacI family transcriptional regulator.
  
     0.718
EFL24737.1
Putative LacI-family transcriptional regulator.
  
     0.712
EFL21679.1
LacI family transcriptional regulator.
  
     0.708
EFL26621.1
Putative LacI family transcriptional regulator.
  
     0.708
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.