Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL21016.1PE-PGRS family protein. (392 aa)    
Predicted Functional Partners:
EFL20691.1
Conserved hypothetical protein; Truncated CDS.
  
     0.634
EFL22597.1
PE-PGRS family protein.
  
     0.618
EFL24217.1
Tetratricopeptide TPR_2.
  
     0.569
EFL27086.1
Conserved hypothetical protein.
  
     0.564
EFL26393.1
Conserved hypothetical protein.
 
     0.550
EFL21820.1
Conserved hypothetical protein.
  
     0.544
EFL21492.1
Conserved hypothetical protein.
  
     0.526
EFL28871.1
Conserved hypothetical protein.
  
     0.525
EFL21017.1
Putative integral membrane protein.
 
     0.506
EFL26400.1
Conserved hypothetical protein.
 
     0.489
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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