Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL21017.1Putative integral membrane protein. (297 aa)    
Predicted Functional Partners:
EFL21018.1
Putative oxidoreductase.
 
     0.957
EFL21019.1
Conserved hypothetical protein.
 
     0.806
EFL24541.1
Putative membrane protein.
 
   
 0.601
EFL21014.1
Putative secreted protein.
 
   
 0.598
EFL25672.1
Putative membrane protein.
  
     0.598
EFL21283.1
Putative secreted protein.
 
   
 0.577
EFL29178.1
PE-PGRS family protein.
 
     0.557
EFL25874.1
Conserved hypothetical protein.
  
     0.543
EFL25877.1
Putative secreted protein.
  
     0.540
EFL27303.1
Putative DNA methyltransferase.
  
     0.507
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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