STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21026.1BNR/Asp-box repeat protein. (401 aa)    
Predicted Functional Partners:
EFL21025.1
Short chain dehydrogenase/reductase family oxidoreductase; Unextendable partial coding region.
 
     0.899
EFL27814.1
Conserved hypothetical protein; Truncated CDS.
 
     0.636
EFL21032.1
LigA protein.
 
     0.605
EFL21024.1
Extracellular ribonuclease.
       0.503
EFL24380.1
Mandelate racemase/muconate lactonizing enzyme family protein.
  
     0.458
EFL21033.1
Pyridoxal phosphate biosynthetic protein PdxA; Belongs to the PdxA family.
 
     0.446
EFL27734.1
Putative sulfatase; Unextendable partial coding region.
 
  
  0.439
EFL21031.1
Bacterial extracellular solute-binding protein, family 5.
 
     0.427
rutA
Pyrimidine utilization protein A; Catalyzes the pyrimidine ring opening between N-3 and C-4 by an unusual flavin hydroperoxide-catalyzed mechanism to yield ureidoacrylate peracid. It cleaves pyrmidine rings directly by adding oxygen atoms, making a toxic ureidoacrylate peracid product which can be spontaneously reduced to ureidoacrylate.
  
     0.425
EFL26101.1
Conserved hypothetical protein.
  
  0.413
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.