STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21029.1Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Unextendable partial coding region. (268 aa)    
Predicted Functional Partners:
EFL21030.1
Putative ABC transporter, permease protein.
 
  0.976
EFL28703.1
Putative transport system permease protein.
 
 
 0.939
EFL27425.1
Putative transport system permease protein.
 
 
 0.927
EFL22421.1
Peptide ABC transporter, permease.
 
  0.912
EFL28829.1
Peptide/opine/nickel uptake family ABC transporter, permease.
 
  0.898
EFL28068.1
ABC transporter, peptide/opine/nickel uptake transporter (PepT) family, permease.
 
  0.893
EFL23009.1
Oligopeptide ABC transporter, permease AppC.
 
  0.892
EFL23048.1
Dipeptide transporter (ABC superfamily, membrane).
 
  0.880
EFL23585.1
Glutathione ABC transporter, permease.
 
  0.877
EFL23464.1
Peptide ABC transporter, permease.
 
  0.874
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.