STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21049.1Putative integral membrane protein. (252 aa)    
Predicted Functional Partners:
EFL20703.1
Precorrin-6x reductase CbiJ/CobK.
       0.605
EFL27414.1
Alpha/beta hydrolase.
       0.605
EFL21750.1
Conserved hypothetical protein.
       0.600
EFL22801.1
Dps family DNA-binding stress response protein; Belongs to the Dps family.
       0.599
EFL21050.1
Hypothetical protein.
       0.596
EFL21051.1
Putative serine/threonine kinase anti-sigma factor.
       0.596
pheT
phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.565
EFL23898.1
Putative tetratricopeptide repeat protein.
   
 
 0.503
EFL24780.1
Hypothetical protein.
   
 
 0.498
EFL23438.1
Probable serine protease (serine proteinase).
    
 
 0.453
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.