STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21060.1Putative transcriptional regulatory protein. (221 aa)    
Predicted Functional Partners:
EFL21059.1
butyryl-CoA dehydrogenase.
       0.794
EFL22338.1
KanY protein.
  
   
 0.562
EFL26796.1
Putative transcription regulator protein.
  
   
 0.555
EFL26470.1
Conserved hypothetical protein.
  
     0.533
EFL24171.1
TetR-family regulatory protein; Unextendable partial coding region.
  
     0.507
EFL22919.1
Putative RNA-binding protein; Belongs to the UPF0109 family.
      
 0.503
EFL24917.1
Putative TrkA-C domain protein.
      
 0.503
EFL22859.1
GCN5-related N-acetyltransferase.
  
     0.500
EFL23273.1
Putative TetR-family transcriptional regulator.
  
     0.491
EFL26075.1
Putative ATP/GTP-binding protein.
  
     0.475
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.