STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21070.1Translation initiation factor IF-2. (459 aa)    
Predicted Functional Partners:
EFL21068.1
Acetylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.815
EFL21069.1
LigA protein.
       0.815
EFL22577.1
4-alpha-D-((1-4)-alpha-D-glucano)trehalose trehalohydrolase; Truncated CDS; Belongs to the glycosyl hydrolase 13 family.
   
 0.768
EFL23096.1
1,4-alpha-glucan branching enzyme.
   
 0.768
EFL21385.1
Mannose-1-phosphate guanyltransferase.
  
 0.676
EFL21067.1
Putative vgr-related protein.
       0.665
EFL21071.1
Short chain dehydrogenase/reductase family oxidoreductase.
  
    0.643
EFL21075.1
PE-PGRS family protein.
       0.614
EFL23393.1
Putative ATP-dependent DNA helicase PcrA.
    
 
 0.611
EFL27452.1
Alpha/beta hydrolase.
   
 
 0.610
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.