STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21071.1Short chain dehydrogenase/reductase family oxidoreductase. (262 aa)    
Predicted Functional Partners:
EFL21630.1
Non-ribosomal peptide synthetase.
  
 0.836
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.808
EFL21075.1
PE-PGRS family protein.
  
    0.794
EFL21073.1
Major facilitator superfamily transporter MFS_1.
  
    0.791
EFL21074.1
Tetracenomycin polyketide synthesis 8-O-methyltransferase.
   
  0.785
EFL21072.1
Conserved hypothetical protein.
       0.773
EFL23922.1
Short-chain dehydrogenase/reductase family oxidoreductase.
  
     0.766
EFL28177.1
Linear gramicidin synthetase LgrC.
  
 0.764
EFL28178.1
Non-ribosomal peptide synthetase; Unextendable partial coding region.
  
 0.764
EFL28179.1
Putative phosphopantetheine attachment site; Unextendable partial coding region.
  
 0.764
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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