STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21075.1PE-PGRS family protein. (290 aa)    
Predicted Functional Partners:
EFL21071.1
Short chain dehydrogenase/reductase family oxidoreductase.
  
    0.794
EFL21074.1
Tetracenomycin polyketide synthesis 8-O-methyltransferase.
       0.790
EFL21072.1
Conserved hypothetical protein.
       0.782
EFL21073.1
Major facilitator superfamily transporter MFS_1.
       0.782
EFL21076.1
CysE/LacA/LpxA/NodL family acetyltransferase.
       0.704
EFL26727.1
Pullulanase (Alpha-dextrin endo-1,6-alpha-glucosidase) (Pullulan 6-glucanohydrolase).
  
 
 0.661
EFL21068.1
Acetylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.614
EFL21069.1
LigA protein.
       0.614
EFL21070.1
Translation initiation factor IF-2.
       0.614
EFL21077.1
Beta-phosphoglucomutase family glycoprotease/hydrolase.
     
 0.613
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.