Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL21078.1Alpha-amylase. (538 aa)    
Predicted Functional Partners:
EFL23095.1
Trehalose synthase-fused probable maltokinase.
 0.944
EFL21079.1
Prephenate dehydrogenase.
       0.773
EFL21080.1
PE-PGRS family protein.
       0.773
EFL23094.1
Maltose alpha-D-glucosyltransferase.
 
  
0.759
EFL22044.1
Alpha-galactosidase.
  
 
 0.749
EFL26301.1
Alpha-galactosidase.
  
 
 0.747
EFL25886.1
Beta-galactosidase.
 
 
 0.735
EFL26100.1
4-alpha-glucanotransferase.
  
 
 0.734
EFL25118.1
Glycosyl transferase.
   
 0.725
EFL25894.1
Glycosyl transferase.
   
 0.725
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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