STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21095.1Putative zinc-containing dehydrogenase. (339 aa)    
Predicted Functional Partners:
EFL21094.1
Tautomerase enzyme superfamily protein; Truncated CDS; Belongs to the 4-oxalocrotonate tautomerase family.
 
     0.903
EFL28961.1
S-(hydroxymethyl)glutathione dehydrogenase.
  
  
 
0.832
EFL20988.1
Alcohol dehydrogenase, zinc-containing.
  
  
 
0.830
EFL20878.1
Alcohol dehydrogenase, zinc-containing; Unextendable partial coding region.
 
  0.828
EFL24963.1
Zinc-binding dehydrogenase.
  
 
  0.822
EFL23765.1
PTS system, fructose-specific family, IIABC component.
  
 
 0.767
EFL25612.1
PTS system, fructose-specific IIABC component.
  
 
 0.767
EFL25810.1
Putative dehydrogenase.
  
     0.764
EFL27585.1
L-iditol 2-dehydrogenase.
  
     0.761
EFL27881.1
L-idonate 5-dehydrogenase; Truncated CDS.
  
     0.757
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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