STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21107.1LigA protein. (437 aa)    
Predicted Functional Partners:
EFL22809.1
Sensor histidine kinase/response regulator.
   
 0.988
EFL27138.1
Sensor histidine kinase/response regulator.
   
 0.971
EFL24562.1
Putative membrane protein.
   
 0.844
EFL20670.1
Sensor histidine kinase/response regulator.
   
 0.818
EFL23898.1
Putative tetratricopeptide repeat protein.
   
 0.816
EFL21106.1
Glyoxalase.
       0.807
EFL28265.1
Putative LigA.
    
 0.789
EFL27779.1
Putative PAS fold protein.
   
 0.784
EFL21051.1
Putative serine/threonine kinase anti-sigma factor.
  
 0.762
EFL23497.1
Putative membrane protein.
  
 0.762
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.