STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21108.1Membrane protein. (176 aa)    
Predicted Functional Partners:
EFL21107.1
LigA protein.
       0.700
EFL21106.1
Glyoxalase.
       0.693
EFL28555.1
Conserved hypothetical protein.
  
     0.503
EFL22122.1
G6PDH family F420-dependent oxidoreductase.
  
     0.495
EFL27172.1
Conserved hypothetical protein.
  
     0.489
EFL22317.1
F420-dependent glucose-6-phosphate dehydrogenase FGD1.
  
     0.475
hmtP
Conserved hypothetical protein.
  
     0.437
EFL23942.1
Conserved hypothetical protein.
  
     0.424
EFL22395.1
Methylenetetrahydromethanopterin reductase.
  
     0.413
EFL24745.1
Conserved hypothetical protein.
  
     0.412
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.