STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21118.1Conserved domain protein. (73 aa)    
Predicted Functional Partners:
EFL21117.1
Fic family toxin-antitoxin system, toxin component.
       0.890
EFL21120.1
Probable F420-dependent oxidoreductase, MSMEG_2516 family.
       0.758
EFL21121.1
Putative acetyltransferase.
       0.697
EFL21125.1
Conserved hypothetical protein.
       0.605
EFL23680.1
ABC lipoprotein transporter, permease component.
       0.605
EFL21119.1
Putative ABC transporter, ATP-binding protein.
       0.571
EFL21127.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.568
EFL21128.1
G/U mismatch-specific DNA glycosylase.
       0.448
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.